1 00:00:12,470 --> 00:00:09,770 thank you so I am starting off the 2 00:00:14,390 --> 00:00:12,480 isotope section but I want to let you 3 00:00:17,150 --> 00:00:14,400 know that i am not talking at all about 4 00:00:19,939 --> 00:00:17,160 isotopes i actually asked the organizers 5 00:00:22,939 --> 00:00:19,949 but to put me on wednesday in case of 6 00:00:24,859 --> 00:00:22,949 travel problems on monday so anyway no 7 00:00:28,759 --> 00:00:24,869 isotopes sorry feel free to leave if you 8 00:00:31,130 --> 00:00:28,769 want so background why are we looking at 9 00:00:34,880 --> 00:00:31,140 low pressure well we try to mimic 10 00:00:37,280 --> 00:00:34,890 Martian conditions and Mars pressure is 11 00:00:39,470 --> 00:00:37,290 much much lower than that on earth it's 12 00:00:41,299 --> 00:00:39,480 about seven millibar well as Earth 13 00:00:43,490 --> 00:00:41,309 surface pressures about a thousand 14 00:00:46,069 --> 00:00:43,500 millibar and nowhere on earth can we 15 00:00:48,110 --> 00:00:46,079 actually get to seven millibar even at 16 00:00:51,590 --> 00:00:48,120 the top of Mount Everest and so we're 17 00:00:53,150 --> 00:00:51,600 looking to see you know there's no life 18 00:00:55,040 --> 00:00:53,160 on Earth here that evolved at low 19 00:00:57,350 --> 00:00:55,050 pressure so we're actually very 20 00:00:59,180 --> 00:00:57,360 interested in this topic and what's 21 00:01:01,250 --> 00:00:59,190 interesting is that few experiments 22 00:01:05,200 --> 00:01:01,260 actually test the effect of low pressure 23 00:01:07,700 --> 00:01:05,210 on organism metabolism and growth 24 00:01:10,490 --> 00:01:07,710 however if you were here Monday you 25 00:01:14,780 --> 00:01:10,500 heard Sam waters talk about low pressure 26 00:01:16,940 --> 00:01:14,790 and so she gave a great introduction to 27 00:01:18,950 --> 00:01:16,950 why we look at low pressure and her lap 28 00:01:21,530 --> 00:01:18,960 she worked in the Nicholson lab and 29 00:01:24,020 --> 00:01:21,540 Andrew sugar who is also at the 30 00:01:25,880 --> 00:01:24,030 University of Florida has looked at 22 31 00:01:28,039 --> 00:01:25,890 different bacterial species that are 32 00:01:30,140 --> 00:01:28,049 commonly found on earth some are found 33 00:01:33,170 --> 00:01:30,150 in spacecraft clean rooms and he's 34 00:01:36,620 --> 00:01:33,180 looked at survival and growth under low 35 00:01:39,890 --> 00:01:36,630 pressure and so sugar and Nicholson 36 00:01:43,399 --> 00:01:39,900 found that there's this 25 millibar 37 00:01:46,219 --> 00:01:43,409 limit to growth where most species are 38 00:01:48,410 --> 00:01:46,229 able to grow and metabolize down to 25 39 00:01:51,620 --> 00:01:48,420 millibar but then they reach this limit 40 00:01:54,080 --> 00:01:51,630 where many species either died off or 41 00:01:57,050 --> 00:01:54,090 they simply can't grow anymore and so 42 00:01:58,819 --> 00:01:57,060 we're interested in figuring out maybe 43 00:02:03,200 --> 00:01:58,829 why this limit occurs and looking more 44 00:02:05,120 --> 00:02:03,210 into this limit so in my lab we use 45 00:02:07,520 --> 00:02:05,130 methanogens and they're members of the 46 00:02:10,070 --> 00:02:07,530 domain Archaea they're anaerobic and 47 00:02:11,860 --> 00:02:10,080 they use molecular hydrogen as an energy 48 00:02:13,660 --> 00:02:11,870 source in carbon 49 00:02:17,170 --> 00:02:13,670 side as a carbon source which is found 50 00:02:19,300 --> 00:02:17,180 on Mars and we use for species with a no 51 00:02:21,490 --> 00:02:19,310 thermo vector wolfy I nathanael star 52 00:02:25,020 --> 00:02:21,500 Cena Barker I Nathanael bacterium for me 53 00:02:27,820 --> 00:02:25,030 sikkim methanococcus Meeropol udhas so 54 00:02:30,339 --> 00:02:27,830 in the parenthesis you'll see their 55 00:02:32,259 --> 00:02:30,349 optimum growth temperature which it's 56 00:02:35,470 --> 00:02:32,269 obviously very high and not very Mars 57 00:02:38,020 --> 00:02:35,480 like but the reason that we don't use a 58 00:02:41,020 --> 00:02:38,030 cycra file or a cold loving with antigen 59 00:02:44,619 --> 00:02:41,030 is because they just grow so slowly that 60 00:02:47,490 --> 00:02:44,629 I would be here for another 20 years and 61 00:02:52,990 --> 00:02:47,500 my advisor would be like just just leave 62 00:02:57,009 --> 00:02:53,000 so we do use a thermophilic methanogens 63 00:02:58,539 --> 00:02:57,019 but they can survive low pressure and i 64 00:03:02,830 --> 00:02:58,549 have other experiments that show that 65 00:03:06,309 --> 00:03:02,840 but these four species are they 66 00:03:08,140 --> 00:03:06,319 basically show the breadth of the 67 00:03:12,130 --> 00:03:08,150 methanogenic archaea and that's why we 68 00:03:14,530 --> 00:03:12,140 use these for so in this talk i will 69 00:03:16,960 --> 00:03:14,540 talk to you about six experiments i ran 70 00:03:18,940 --> 00:03:16,970 from at varying pressure and the 71 00:03:22,030 --> 00:03:18,950 pressures are listed here and you can 72 00:03:25,150 --> 00:03:22,040 see that the first experiment was up to 73 00:03:27,699 --> 00:03:25,160 143 millibar and experiment 5 & 6 74 00:03:30,039 --> 00:03:27,709 arranged between six and twenty mellow 75 00:03:32,020 --> 00:03:30,049 bar and the reason we have arranged is 76 00:03:36,520 --> 00:03:32,030 because we are still developing our 77 00:03:40,930 --> 00:03:36,530 vacuum chamber and right now our Val are 78 00:03:42,250 --> 00:03:40,940 open and closed valve isn't as precise 79 00:03:45,039 --> 00:03:42,260 as we would like it to be and that's why 80 00:03:48,550 --> 00:03:45,049 we have that range there but we're going 81 00:03:50,710 --> 00:03:48,560 to fix that in the future but in a in 82 00:03:54,009 --> 00:03:50,720 each experiment I had 20 test tubes 83 00:03:55,479 --> 00:03:54,019 total which included five test tubes for 84 00:03:57,520 --> 00:03:55,489 each of the four species so there are 85 00:04:01,300 --> 00:03:57,530 five replicates and then these 86 00:04:04,990 --> 00:04:01,310 methanogens survive in liquid medium and 87 00:04:07,569 --> 00:04:05,000 so that is a problem at low pressure 88 00:04:09,699 --> 00:04:07,579 which I'll get to but each tube is ten 89 00:04:11,589 --> 00:04:09,709 milliliters of liquid medium prepared 90 00:04:14,020 --> 00:04:11,599 anaerobically and so it contains carbon 91 00:04:15,970 --> 00:04:14,030 dioxide its pressurized with hydrogen 92 00:04:18,430 --> 00:04:15,980 gas which is their energy source and 93 00:04:24,580 --> 00:04:18,440 growth is monitored by methane 94 00:04:26,890 --> 00:04:24,590 action so once I make these test tubes 95 00:04:29,110 --> 00:04:26,900 with the myth antigens in them I put 96 00:04:30,610 --> 00:04:29,120 them in the Pegasus planetary simulation 97 00:04:35,440 --> 00:04:30,620 chamber at the University of Arkansas 98 00:04:37,330 --> 00:04:35,450 and before I sew these these tubes are 99 00:04:39,880 --> 00:04:37,340 sealed and before I puncture them i 100 00:04:42,040 --> 00:04:39,890 evacuate the chamber and then fill it 101 00:04:44,920 --> 00:04:42,050 with hydrogen and carbon dioxide gas 102 00:04:46,720 --> 00:04:44,930 then evacuated again and I cycle this 103 00:04:49,060 --> 00:04:46,730 three times in order to get rid of all 104 00:04:51,210 --> 00:04:49,070 that residual oxygen and atmosphere in 105 00:04:53,830 --> 00:04:51,220 there and then I let the chamber 106 00:04:56,160 --> 00:04:53,840 stabilize for about a day due to 107 00:05:00,130 --> 00:04:56,170 outgassing from the walls and whatnot 108 00:05:02,110 --> 00:05:00,140 then with this specialized device you 109 00:05:04,990 --> 00:05:02,120 see here which I have nicknamed the 110 00:05:08,230 --> 00:05:05,000 pokey device I'm able to turn a crank 111 00:05:10,240 --> 00:05:08,240 and it will either lower or raise and 112 00:05:12,640 --> 00:05:10,250 I'm able to puncture the tubes within 113 00:05:16,900 --> 00:05:12,650 the chamber at the pressure that I 114 00:05:19,090 --> 00:05:16,910 desire and so then the tubes remain 115 00:05:21,580 --> 00:05:19,100 punctured and they can équilibre twith 116 00:05:23,320 --> 00:05:21,590 the atmosphere and then on the second to 117 00:05:25,480 --> 00:05:23,330 last day I fill up the chamber with 118 00:05:28,390 --> 00:05:25,490 carbon dioxide otherwise there'd be a 119 00:05:30,460 --> 00:05:28,400 suction effect in the tubes and if I 120 00:05:33,700 --> 00:05:30,470 open the chamber it would allow oxygen 121 00:05:35,409 --> 00:05:33,710 in which would kill them and then on I 122 00:05:37,659 --> 00:05:35,419 unplug sure the tube so that they're 123 00:05:41,320 --> 00:05:37,669 full of carbon dioxide and then I take 124 00:05:43,270 --> 00:05:41,330 them out the methods were the same for 125 00:05:46,840 --> 00:05:43,280 all six experiments except for 126 00:05:49,900 --> 00:05:46,850 experiment six where I had a cotton ball 127 00:05:52,690 --> 00:05:49,910 right above the liquid and six or five 128 00:05:54,790 --> 00:05:52,700 grams of JSC Mars one to act as a 129 00:05:58,240 --> 00:05:54,800 diffusion barrier to slow the 130 00:06:01,420 --> 00:05:58,250 evaporation of water so here are my 131 00:06:03,820 --> 00:06:01,430 results for one of our organisms and 132 00:06:05,620 --> 00:06:03,830 it's very there's a lot of information 133 00:06:08,320 --> 00:06:05,630 here so I'm going to go over it slowly 134 00:06:10,060 --> 00:06:08,330 on the left is methane production which 135 00:06:13,090 --> 00:06:10,070 is how we measure the growth in our of 136 00:06:15,190 --> 00:06:13,100 our methanogens and on the bottom are 137 00:06:17,560 --> 00:06:15,200 the experiments so there's two columns 138 00:06:22,330 --> 00:06:17,570 for each of the six experiments and the 139 00:06:24,880 --> 00:06:22,340 pressures are also listed there and each 140 00:06:27,520 --> 00:06:24,890 column the light gray is the original 141 00:06:31,120 --> 00:06:27,530 tube and that corresponds to the tube 142 00:06:31,959 --> 00:06:31,130 that was actually in the chamber under 143 00:06:34,899 --> 00:06:31,969 low pressure 144 00:06:37,659 --> 00:06:34,909 and then the dark great column is the 145 00:06:40,059 --> 00:06:37,669 tube that I transferred point five 146 00:06:44,319 --> 00:06:40,069 milliliters from the original tube to 147 00:06:46,809 --> 00:06:44,329 the transfer tube okay so these all this 148 00:06:49,059 --> 00:06:46,819 methane production is actually following 149 00:06:51,549 --> 00:06:49,069 exposure and following an incubation 150 00:06:54,159 --> 00:06:51,559 period so i had the tubes in the chamber 151 00:06:57,159 --> 00:06:54,169 exposed to low pressure i took them out 152 00:06:59,319 --> 00:06:57,169 I'd performed a transfer and then I put 153 00:07:02,499 --> 00:06:59,329 all the tubes at their ideal incubation 154 00:07:06,429 --> 00:07:02,509 temperature and so what we can say is 155 00:07:07,989 --> 00:07:06,439 that initially when I fill the chamber 156 00:07:10,509 --> 00:07:07,999 up with carbon dioxide the methane 157 00:07:12,399 --> 00:07:10,519 content is about zero because the tubes 158 00:07:16,509 --> 00:07:12,409 are being filled with carbon dioxide and 159 00:07:21,339 --> 00:07:16,519 so we can compare these post-exposure 160 00:07:23,889 --> 00:07:21,349 methane values to the zero points of the 161 00:07:26,829 --> 00:07:23,899 actual experiment and so you'll see that 162 00:07:30,579 --> 00:07:26,839 there's growth or methane production in 163 00:07:33,009 --> 00:07:30,589 each of the six experiments even at even 164 00:07:35,979 --> 00:07:33,019 if it's just a few percent at six Mel 165 00:07:38,290 --> 00:07:35,989 bar and so the reason there are no 166 00:07:39,850 --> 00:07:38,300 original tubes for experiments five and 167 00:07:43,749 --> 00:07:39,860 six is because there was so much 168 00:07:45,609 --> 00:07:43,759 evaporation that there wasn't after 169 00:07:47,829 --> 00:07:45,619 performing the point five milliliter 170 00:07:51,579 --> 00:07:47,839 transfer there wasn't anything left in 171 00:07:54,850 --> 00:07:51,589 those tubes so I just discarded them so 172 00:07:56,589 --> 00:07:54,860 this is for Barker I wolfie I and 173 00:07:59,019 --> 00:07:56,599 Meeropol udhas you see the same thing 174 00:08:02,949 --> 00:07:59,029 there's methane production following 175 00:08:04,779 --> 00:08:02,959 exposure to low pressure and for me 176 00:08:07,019 --> 00:08:04,789 cecum the reason I show this one 177 00:08:09,759 --> 00:08:07,029 separately is because you can see that 178 00:08:11,979 --> 00:08:09,769 the methane production in both the 179 00:08:15,279 --> 00:08:11,989 original and the transfer tubes is very 180 00:08:17,499 --> 00:08:15,289 similar and so if you were considering 181 00:08:21,279 --> 00:08:17,509 that oh well you know you transfer them 182 00:08:22,959 --> 00:08:21,289 with antigens and they have new media 183 00:08:25,379 --> 00:08:22,969 and new growth so maybe they went 184 00:08:28,659 --> 00:08:25,389 dormant and then you know we're able to 185 00:08:31,089 --> 00:08:28,669 regrow again maybe the transfer media is 186 00:08:33,369 --> 00:08:31,099 different maybe the low pressure you 187 00:08:35,019 --> 00:08:33,379 know affected their media the growth 188 00:08:39,040 --> 00:08:35,029 between the original tubes and the 189 00:08:42,009 --> 00:08:39,050 transfer tubes are the same so in 190 00:08:44,820 --> 00:08:42,019 conclusion the low pressure exposure is 191 00:08:47,340 --> 00:08:44,830 not lethal to actively met 192 00:08:51,180 --> 00:08:47,350 rising cells so right now we can't 193 00:08:52,410 --> 00:08:51,190 measure in situ growth of of them 194 00:08:54,360 --> 00:08:52,420 advantage ins during the exposure 195 00:08:57,450 --> 00:08:54,370 because it's actually fairly difficult 196 00:09:00,390 --> 00:08:57,460 to take a sample out of a low pressure 197 00:09:02,430 --> 00:09:00,400 vacuum but so there's sort of a black 198 00:09:05,070 --> 00:09:02,440 box of during the exposure what is 199 00:09:06,870 --> 00:09:05,080 actually happening but we know that we 200 00:09:08,940 --> 00:09:06,880 had actively metabolizing methanogens 201 00:09:10,830 --> 00:09:08,950 before the experiment and then we had 202 00:09:14,010 --> 00:09:10,840 actively metabolising with antigens 203 00:09:15,840 --> 00:09:14,020 after the experiment the limiting factor 204 00:09:18,600 --> 00:09:15,850 is currently the evaporation of liquid 205 00:09:20,880 --> 00:09:18,610 media this is not something we can get 206 00:09:22,740 --> 00:09:20,890 rid of considering we're working at low 207 00:09:25,710 --> 00:09:22,750 pressure if we lowered the temperature 208 00:09:28,350 --> 00:09:25,720 20 degrees the methanogens wouldn't grow 209 00:09:29,820 --> 00:09:28,360 anyway even if we had a psycho Phillip 210 00:09:32,700 --> 00:09:29,830 meth antigen it would just grow so 211 00:09:36,600 --> 00:09:32,710 slowly that even the slowly rate of 212 00:09:38,610 --> 00:09:36,610 evaporation of water might be faster 213 00:09:42,480 --> 00:09:38,620 than the actual slow growth rate of a 214 00:09:44,640 --> 00:09:42,490 psycho Phillip organism and then the 215 00:09:46,680 --> 00:09:44,650 methane production and optical density 216 00:09:49,710 --> 00:09:46,690 measurements that I haven't shown do 217 00:09:52,740 --> 00:09:49,720 indicate growth at least following 218 00:09:54,810 --> 00:09:52,750 exposure but what we really want to know 219 00:09:57,630 --> 00:09:54,820 is are the cells capable of active 220 00:10:01,490 --> 00:09:57,640 growth at low pressure institute during 221 00:10:06,360 --> 00:10:01,500 the experiment and so this fall we've 222 00:10:08,850 --> 00:10:06,370 achieved or obtained a device that we're 223 00:10:11,390 --> 00:10:08,860 able to put an actual whole system 224 00:10:13,980 --> 00:10:11,400 within our chamber to measure real time 225 00:10:16,230 --> 00:10:13,990 methane production and hopefully we're 226 00:10:20,850 --> 00:10:16,240 going to see if it works and it should 227 00:10:22,800 --> 00:10:20,860 but you know science so we'll see and 228 00:10:25,530 --> 00:10:22,810 then we're also going to attempt to 229 00:10:27,270 --> 00:10:25,540 lengthen our experiments using various 230 00:10:30,960 --> 00:10:27,280 diffusion barriers such as different 231 00:10:33,720 --> 00:10:30,970 soils or salts in the media or even just 232 00:10:35,640 --> 00:10:33,730 adding a hydrophobic filter on top of 233 00:10:39,690 --> 00:10:35,650 our syringe needles in the chamber just 234 00:10:43,500 --> 00:10:39,700 to slow that evaporation down and so I'm 235 00:10:45,870 --> 00:10:43,510 going to be that guy and I do have a 236 00:10:48,390 --> 00:10:45,880 call for help I've spoken to many of you 237 00:10:50,910 --> 00:10:48,400 on Monday and greatly appreciate your 238 00:10:53,130 --> 00:10:50,920 input and probably be emailing you in 239 00:10:54,930 --> 00:10:53,140 the future but you know we're trying to 240 00:10:56,879 --> 00:10:54,940 set up our low pressure vacuum chamber 241 00:10:58,859 --> 00:10:56,889 if anyone has 242 00:11:03,090 --> 00:10:58,869 the information about any of these 243 00:11:06,900 --> 00:11:03,100 topics it'd be greatly appreciated but 244 00:11:08,699 --> 00:11:06,910 you know competition as well so I'm 245 00:11:19,169 --> 00:11:08,709 working on it yeah we're all friends 246 00:11:21,869 --> 00:11:19,179 here but other than that thank you all 247 00:11:30,150 --> 00:11:21,879 right do we have any questions either 248 00:11:31,499 --> 00:11:30,160 online or in person so you're growing 249 00:11:34,409 --> 00:11:31,509 these cells on hydrogen and you're 250 00:11:39,119 --> 00:11:34,419 growing them at Steven millibars total 251 00:11:40,829 --> 00:11:39,129 preciate it was a t20 h202 so may it 252 00:11:42,809 --> 00:11:40,839 just be that that low-pressure there's 253 00:11:45,210 --> 00:11:42,819 just not enough hydrogen for them to 254 00:11:48,720 --> 00:11:45,220 grow yeah and that that's definitely a 255 00:11:51,059 --> 00:11:48,730 possibility other studies have shown 256 00:11:53,819 --> 00:11:51,069 that they can grow on very very limited 257 00:11:55,289 --> 00:11:53,829 amounts of hydrogen but that's something 258 00:11:57,749 --> 00:11:55,299 that we definitely need to take into 259 00:11:59,579 --> 00:11:57,759 account in our our false we should talk 260 00:12:09,470 --> 00:11:59,589 about Steven phallic hydrogen limitation 261 00:12:12,449 --> 00:12:09,480 okay so I know at least a seat of orange 262 00:12:13,619 --> 00:12:12,459 can use acetate as an electron donor can 263 00:12:16,199 --> 00:12:13,629 you use that instead of hydrogen a 264 00:12:21,359 --> 00:12:16,209 fascinating factory um yes that's 265 00:12:23,579 --> 00:12:21,369 possible where we use these species just 266 00:12:25,799 --> 00:12:23,589 because they don't require any organic 267 00:12:28,319 --> 00:12:25,809 compounds and hydrogen and carbon 268 00:12:30,569 --> 00:12:28,329 dioxide well carbon dioxide Minos on 269 00:12:32,549 --> 00:12:30,579 Mars but it's also postulated that 270 00:12:34,679 --> 00:12:32,559 hydrogen is available and they're the 271 00:12:37,079 --> 00:12:34,689 simplest compounds so that's why we use